三维重建 PyQt Python VTK 医学图像的可视化 vtkImageView2三视图(横断面,冠状面,矢状面)

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三维重建 PyQt Python VTK 医学图像的可视化 vtkImageView2三视图(横断面,冠状面,矢状面)

2023-11-22 08:09| 来源: 网络整理| 查看: 265

概述:

本文实现了 Python C++ 版本 的 四视图,MPR 和 三维重建;同时有C++ Qt版本

效果展示:

视频展示:

VTK四视图

vtkImageViewer2

一个方便易用的2D图像显示类,它封装了vtkRenderWindow, vtkRender, vtkImageActor和vtkImageMapToWinowLevelColors。同时,包含了一个vtkInteractorStyleImage的交互方式,使得显示和交互变得更加简单。

3D医学图像有很多,不仅只有CT,还有MRI,超声波,X-光等,各具有独特的诊断优势。下面以CT图像数据作为示例:

效果:

 1. DICOM 数据读取 reader = vtk.vtkDICOMImageReader() reader.SetDirectoryName("D:/datasource/fei/ScalarVolume_13") reader.Update()

2.设置imageViewer 可以设置slice,3维数据的方向,以及窗口大小、窗宽、窗位等等  

imageviewer = vtk.vtkImageViewer2() imageviewer.SetInputConnection(reader.GetOutputPort()) interactor = vtk.vtkRenderWindowInteractor() imageviewer.SetupInteractor(interactor) # 添加交互器 # imageviewer.SetSize(400, 400) imageviewer.SetColorLevel(100) # 窗位 imageviewer.SetColorWindow(3000) # 窗宽 imageviewer.SetSliceOrientationToXY() # 设置切片方向为XY imageviewer.SetSlice(imageviewer.GetSliceMin()) # 设置切片起始位置为切片最小值

all code; 可以设置 :横断面,冠状面,矢状面

import vtk reader = vtk.vtkDICOMImageReader() reader.SetDirectoryName("CT") reader.Update()   imageviewer = vtk.vtkImageViewer2() imageviewer.SetInputConnection(reader.GetOutputPort()) interactor = vtk.vtkRenderWindowInteractor() imageviewer.SetupInteractor(interactor)#添加交互器 #imageviewer.SetSize(400, 400) imageviewer.SetColorLevel(100)#窗位 imageviewer.SetColorWindow(3000)#窗宽 imageviewer.SetSliceOrientationToXY()#设置切片方向为XY imageviewer.SetSlice(imageviewer.GetSliceMin())#设置切片起始位置为切片最小值 #imageviewer.SetSliceOrientationToXZ() #imageviewer.SetSliceOrientationToYZ() #print(imageviewer.GetSliceOrientation())#打印切片方向,XY为2,XZ为1,YZ为0 imageviewer.Render() interactor.Start()

Using vtkResliceImageViewer or vtkImageViewer2 with Python3+PyQt5

import sys import vtk from PyQt5 import QtCore, QtGui from PyQt5 import QtWidgets from vtk.qt.QVTKRenderWindowInteractor import QVTKRenderWindowInteractor class MainWindow(QtWidgets.QMainWindow): def __init__(self, parent = None): QtWidgets.QMainWindow.__init__(self, parent) self.frame = QtWidgets.QFrame() self.vl = QtWidgets.QVBoxLayout() self.vtkWidget = QVTKRenderWindowInteractor(self.frame) self.vl.addWidget(self.vtkWidget) pathDicomDir = "/path/to/dicom/data" reader = vtk.vtkDICOMImageReader() reader.SetDirectoryName(pathDicomDir) reader.Update() self.viewer = vtk.vtkImageViewer() # self.viewer = vtk.vtkImageViewer2() # self.viewer = vtk.vtkResliceImageViewer() self.viewer.SetInputData(reader.GetOutput()) self.viewer.SetupInteractor(self.vtkWidget) self.viewer.SetRenderWindow(self.vtkWidget.GetRenderWindow()) self.viewer.Render() self.frame.setLayout(self.vl) self.setCentralWidget(self.frame) self.show() if __name__ == "__main__": app = QtWidgets.QApplication(sys.argv) window = MainWindow() sys.exit(app.exec_())

C++:

#include "vtkSmartPointer.h" #include "vtkObjectFactory.h" #include "vtkRenderWindow.h" #include "vtkGenericRenderWindowInteractor.h" #include "vtkRenderer.h" #include "vtkActor.h" #include "vtkDICOMImageReader.h" #include "vtkImageViewer2.h" #include "vtkInteractorStyleImage.h" class myVtkInteractorStyleImage : public vtkInteractorStyleImage { public: static myVtkInteractorStyleImage* New(); vtkTypeMacro(myVtkInteractorStyleImage, vtkInteractorStyleImage); protected: vtkImageViewer2* ImageViewer; int Slice; int MinSlice; int MaxSlice; public: void SetImageViewer(vtkImageViewer2* imageViewer) { this->ImageViewer = imageViewer; this->MinSlice = imageViewer->GetSliceMin(); this->MaxSlice = imageViewer->GetSliceMax(); this->Slice = (this->MinSlice + this->MaxSlice) / 2; this->ImageViewer->SetSlice(this->Slice); this->ImageViewer->Render(); } protected: virtual void OnMouseWheelForward() { if (this->Slice < this->MaxSlice) { this->Slice += 1; this->ImageViewer->SetSlice(this->Slice); this->ImageViewer->Render(); } } virtual void OnMouseWheelBackward() { if (this->Slice > this->MinSlice) { this->Slice -= 1; this->ImageViewer->SetSlice(this->Slice); this->ImageViewer->Render(); } } }; vtkStandardNewMacro(myVtkInteractorStyleImage); int main(int argc, char* argv[]) { if (argc < 2) { std::cout GetOutputPort()); auto interactor = vtkSmartPointer::New(); imageViewer->SetupInteractor(interactor); imageViewer->SetSize(400, 400); imageViewer->SetColorLevel(500); imageViewer->SetColorWindow(1000); imageViewer->SetSliceOrientationToXY(); imageViewer->GetRenderer()->SetBackground(1, 1, 1); auto myStyle = vtkSmartPointer::New(); myStyle->SetImageViewer(imageViewer); interactor->SetInteractorStyle(myStyle); imageViewer->Render(); imageViewer->GetRenderer()->ResetCamera(); imageViewer->Render(); interactor->Start(); return EXIT_SUCCESS; }



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